BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037B08SP1|AL430350
(909 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 1034 0.0
>3x_Contig1781
Length = 20717
Score = 1034 bits (504), Expect = 0.0
Identities = 693/764 (90%), Gaps = 20/764 (2%)
Strand = Plus / Minus
Query: 146 tgtcttctgctttgtccacacctsactcacattcctctcgagcgctacgattcgcatcac 205
|||||||||||||||||| |||| ||||| |||||| ||||| ||||||||| |||||
Sbjct: 15230 tgtcttctgctttgtccaaacctgactca-attcct-tcgagg--tacgattcg-atcac 15176
Query: 206 tgcgagtcaagtaasamtcagcacacggcctcgcaatttgcccycggcmmtatacttgca 265
|| ||||||||||| | |||||| ||||| ||||||||| ||| |||||||| |
Sbjct: 15175 tg-gagtcaagtaagaatcagca-acggctg---aatttgccctcgg-aatatacttg-a 15123
Query: 266 tcataggcgayarttcagaatgagtaaggagaacatgcagtgamaccaatctctttagcg 325
|||||||||| | ||||||| || |||||| |||||| ||||| ||||||||||||||||
Sbjct: 15122 tcataggcgataattcagaa-ga-taagga-aacatg-agtgaaaccaatctctttagcg 15067
Query: 326 atcttataaaccttttgttcatgttcttggtatstatatgmmtgtcaaaaggcmacggcc 385
||||||||||||||||||||||||||||||||| |||||| ||| ||||||| ||||||
Sbjct: 15066 atcttataaaccttttgttcatgttcttggtatgtatatgaatgtaaaaaggcaacggcc 15007
Query: 386 aatgatctmatcccsgtagcmtacaaaatsttcmamgtmsttcgaacytcttcytcmtta 445
|||||||| ||||| ||||| |||||||| ||| | || ||||||| ||||| || |||
Sbjct: 15006 aatgatctaatcccggtagcatacaaaatgttcaaagtagttcgaacttcttcttcatta 14947
Query: 446 attctttgcmacactctmacagtytcyccagacytgcctaacacgasatcmtcycctgay 505
||||||||| ||||||| ||||| || |||||| |||||||||||| ||| || ||||
Sbjct: 14946 attctttgcaacactctaacagtttctccagacttgcctaacacgagatcatcttctgat 14887
Query: 506 tccggccgagtcctcttaccctttggmtcttgagcataatcygctagcgtyactctctcm 565
|||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 14886 tccggccgagtcctcttaccctttggatcttgagcataatctgctagcgttactctctca 14827
Query: 566 yygacytctacmacagtctcatatacgaggtctacggtctcttgatagccaaatcaaaga 625
||| ||||| ||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 14826 ttgacttctacaacagtctcatata-gaggtcta-ggtctcttgatagccaaatcaaaga 14769
Query: 626 tatctcaggcctagtctgatctccaattactaatgcatccttgaaacctttagtagtgac 685
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 14768 tatt--aggcctagtctgatctccaattactaatgcatcctcgaaacctttagtagtgac 14711
Query: 686 taacgcacatctttctccggttctttccaatgcacaattggttgctagtgtggtacccat 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14710 taacgcacatctttctccggttctttccaatgcacaattggttgctagtgtggtacccat 14651
Query: 746 cctaatggtatcaacgccagagatatctagattctgacctctaggtatcgatttaccttg 805
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14650 cctaatggtatcaacaccagagatatctagattctgacctctaggtatcgatttaccttg 14591
Query: 806 acaaatctcgagtaaacgtcttataccttccaatggagcgtctgggtagttcctagggtc 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14590 acaaatctcgagtaaacgtcttataccttccaatggagcgtctgggtagttcctagggtc 14531
Query: 866 taccgataacaatttgataacaacatcatcctctggwttgcccg 909
|||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 14530 taccgataacaatttgataacaacatcatcctctggattgcccg 14487
Score = 201 bits (98), Expect = 2e-51
Identities = 103/108 (95%)
Strand = Plus / Minus
Query: 1 gatcttgttctctggattgtaacatgtcgcagaatatcccaccacaccgcctgcaggtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15367 gatcttgttctctggattgtaacatgtcgcagaatatcccaccacaccgcctgcaggtcc 15308
Query: 61 cgagagaatggcccttaaacctgaaaatttatktkcmycamcaagacc 108
|||||||||||||||||||||||||||||||| | | || |||||||
Sbjct: 15307 cgagagaatggcccttaaacctgaaaatttatgtgcatcaacaagacc 15260
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3454
Number of Sequences: 1807
Number of extensions: 3454
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.7 bits)
S1: 11 (23.1 bits)
S2: 49 (101.1 bits)